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  • Genotyping
  • Genetic Traits and Colour Codes
  • Genotyping Testing Options
  • Freemartin
  1. Services
  2. Genetic Traits and Colour Codes

Genetic Traits and Colour Codes


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Genetic Traits and Colour Codes

Gene Name Description Gene and Expression Code
Muscle Weakness Newborn calves are weak and unable to stand up or walk shortly after birth resulting in calves becoming weaker over time & typically will succumb to other health issues MWF = tested non-carrier / free of Early Onset Muscle Weakness
MWC = tested carrier of Early Onset Muscle Weakness (heterozygous)
MWS = tested true carrier of Early Onset Muscle Weakness (homozygous)
Brachyspina
BY
Causes abortion & stillborn, shortened spinal cord, long legs & abnormal organs BYC = tested carrier of Brachyspina
BYF = tested non-carrier of Brachyspina
Complex Vertebral Malformation
CVM
Causes still-born calves, abortions, and early embryonic losses CVC = tested carrier of CVM
CVF = tested non-carrier of CVM
Bovine Leucocyte Adhesion Deficiency
BLAD
Deficiency of a normally occurring protein needed for white blood cells or leukocytes, which are body’s infection fighters BLC = tested carrier of BLAD
BLF = tested non-carrier of BLAD
MULEFOOT Toes of foot are joined, giving animal a single hoof, instead of cloven ones MFC = tested carrier of MULEFOOT
MFF = tested non-carrier of MULEFOOT
Deficiency of Uridine Monophosphate Synthase
DUMPS
One of many enzymes contributing to normal metabolic processes DPC = tested carrier of DUMPS
DPF = tested non-carrier of DUMPS
CHOLESTEROL DEFICIENCY A genetic disposition for increased calf losses with Holstein cattle CDF =Tested Free of Cholesterol Deficiency
CDC = Tested Carrier of Cholesterol Deficiency
CDS = Tested True Cholesterol Deficiency
BETA CASEIN A2 A1 and A2 beta-casein are genetic variants of the beta-casein milk protein that differ by one amino acid A2A2 = Beta Casein A2A2
A1A1 = Beta Casein A1A1
A1A2 = Beta Casein A1A2
FACTOR XI Blood clotting disorder XIC = tested carrier of FACTOR XI
XIF = tested non-carrier of FACTOR XI
Citrullinemia
CIT
Accumulation of ammonia and other toxics in blood in baby calves CNC = tested carrier of CIT
CNF = tested non-carrier of CIT
KAPPA CASEIN Results are a combination of A, B and E gene types. BB, AB, BE, AA, AE, EE
BETA LACTOGLOBULIN Results are a combination of A and B gene types. BL-AA, BL-AB, BL-BB
ALPHA S-1 CASEIN Results are a combination of B and C gene types. ACN-BB, ACN-BC, ACN-CC

POLLED & TRANSMITTING CODES

Gene Name Description Gene and Expression Code
POLLED Animals without horns
(Reported born hornless – Not Tested)
POR = code
POLLED
(Current-Indirect test)
Indirect Test
POS = true polled (homozygous PP)
POC = carrier of polled (heterozygous Pp)
POF = free of polled

Birth Codes (Secondary)

Code Description
MB Multiple Birth
ET Embryo Transfer (regular)
ETA Embryo Transfer Adult Clone
ETM Embryo Transfer Manipulation (Divided, Nuclear Transfer, Split)

Coat/Hair Colour Codes

Code Description
AB All Black
AR All Red
AW All White
B/R Black/red
(primarily B&W although exhibits reddish peculiar hair patterns-- muzzles, ears, dorsal stripe, etc.)
B&W Black and White
IC Irregular or other colour (non-typical animals)
R&W Red and White
LB Lineback (animal having a distinct white stripe along the spine)

Coat/Hair Colour Codes

Gene Name Description Gene and Expression Code
Homozygous Black (ED / ED) B&W – black & white RDF – Tested non-carrier of red gene
Red Carrier (ED / e) B&W – black & white RDC – Carrier of red gene
Homozygous Red (e / e) R&W – red & white
Heterozygous Wildtype (e / E+)1 B/R – black/red colour pattern
R&W – red & white
RDC – Carrier of red gene
Heterozygous Black/Wildtype (ED / E+)1 B&W – black & white
B&W – black & white
BRC – Carrier of black/red gene
RDC – Carrier of red gene
Homozygous Wildtype (E+ / E+)1 R&W – red & white
B/R – black/red colour pattern
B&W – black & white
RDC – Carrier of red gene
RDC – Carrier of red gene
BRC – Carrier of black/red gene
Variant Red R&W – red & white VRR – Not tested / determined by lineage
BKC – Carrier of black gene
VRF – Free of Variant Red
VRC – Carrier of Variant Red
VRS – Homozygous Variant Red

GT Codes

Code Description
GTM Genotype on file from DNA Micro-satellite Test
GTS Genotype on file from SNP Genomic Test
GT Indicates on the animal info sheet (AIS) that the animal has been genotyped.
*If both tests have been done, the code GTSM will be displayed

 

All results are made public, published on official documents and the Animal Inquiry page of the Holstein Canada website.


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Legend

  • 1    E+ can be black, black/red or red based on pedigree.
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